personally if I were swapping in a 1200 motor I'd also swap on the 6 speed.
K100 frame, k1200 engine and trans with k1100 motronic.
Pretty sure that you can not use the 6-speed in the k100/k1100 frames. The 84-96 models used the engine & tranny as stressed members in the frame.
The 1200's actually used a perimeter frame which ended up being part of the reason they weighed more (tele-lever system also contributed to the added fat).
Point I'm trying to get at is that while the 1200's retained the extra sturdy engine block of earlier models (thus able to be used as a stressed frame member), the 6-speed was designed with a much lighter case that does not have the strength to be used as a stressed frame member.
Also, the 6-spd's new case has no place for the rear swing-arm to attach .
I'm slowly gathering the materials for the 1200 motor in a 100 or 1100 frame and looked at the 6-spd., regretfully, the only economicaly feasible solution to a stiffer final gear is to swap a lower ratio gearset into your final drive. Think you can get down to a 2.52-ish to 1 final through use of a r1200 c ring gear.
Hope this helps.
Later,
Freelancer