TarmacSurfDude, To help you in your doo dillergence I would suggest that you get familiar with the parts fiche lieberry at Max BMW. By checking for identical part numbers it is possible to tell if a particular part is used across several models and model years. There are many parts that are interchangeable between the K100, K75 and the K1100 so don't limit your searches to just the K100.
Here is the fiche for your brick as a starting point Click on "Change Model" to see parts lists for other bikes.
http://www.maxbmwmotorcycles.com/fiche/DiagramsMain.aspx?vid=51752&rnd=07012015Open it in one window and then open the fiche for another model in a separate window. Then you can compare part numbers.
As far as a seat, there is none better than the Russell Day Long. It makes riding like lounging in a Laz-E-Boy. Next best is the comfort seat that you will often see on the LT and RT models. I would avoid the Corbin. They look real pretty, but the one I had was worse than the stock bench seat. It was excruciating after only a half hour.
+1 on the Parabellum shield. I have one of them on my RT and for it's size it does a nice job. The one for the RS looks like it was original equipment, and I am pretty sure it will give you good protection.
Saddlebags, or tragkorbs as they are more often referred to should be interchangeable between all the K bikes. As Johnny said, the Gen 3 cases are the best as the locks face outward, and they seem to be a tad larger than the earlier models. Also, look at the 22l top case and a tank bag. I would use the fiches to confirm that the mounting bars are the same for all models. I do know that Gen 2 and Gen 3 are interchangeable between 90's k75 and K100 models. The 22l top case is also interchangeable. There are ways to modify the locks so they are all keyed the same as your ignition. Look in the lieberry here for the thread on keying alike.
Beyond seat, shield and tragkorbs the only other mods I would add is a manual fan switch, LED driving/conspicuity lights, and a bunch of ScotchLite reflective material on the back end. Depending on how much you want to get off the beaten path you may or may not want to add a GPS as well.
eBay is an excellent source for the stuff you need as is Craig's list. There are search engines that will search all of the Craig's list entries in North America. It's how I found My Russell seat. Do a Google for "all of Craig's List". You might want to post photos of your bike here as well as where you are located. It will help the members help you.